Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs112909131 chr11:125581436 C/T 0.000188 119 44.38 35.67 23.42 KM Plot
THYM rs11318633 chr6:3265889 GC/G 0 119 4.13 42.25 38.58 KM Plot
THYM rs11319942 chr9:97157725 GC/G 8.26E-5 118 41.77 42.73 17.03 KM Plot
THYM rs113205237 chr8:39936122 CG/C 9.89E-5 118 40.67 48.13 28.43 KM Plot
THYM rs113288065 chr5:67019673 G/A 5.05E-8 117 44.38 41.77 12.93 KM Plot
THYM rs113302711 chr7:135311164 G/GA 0.000319 119 42.82 38.83 22.8 KM Plot
THYM rs113335800 chr4:115556484 G/T 0 118 38.23 46.27 4.13 KM Plot
THYM rs113383525 chr9:97190526 A/C 7.78E-5 119 41.77 40.43 17.03 KM Plot
THYM rs11343785 chr2:30808160 AT/A 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs113461092 chr19:43382522 C/T 0.000136 117 42.9 35 28.43 KM Plot
THYM rs11352299 chr2:30688844 AT/A 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs113563784 chr9:97193069 C/T 7.78E-5 119 41.77 40.43 17.03 KM Plot
THYM rs113591626 chr7:846680 C/T 0.000116 114 46.6 22.5 25.47 KM Plot
THYM rs113628307 chr2:240844190 G/A 1.75E-12 116 38.83 57.43 12.63 KM Plot
THYM rs113681861 chr5:149885169 G/C 1.28E-8 119 41.77 35.13 12.63 KM Plot